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You searched for: EV230894 (EV-TRACK ID)
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Details | EV-TRACK ID | Experiment nr. | Species | Sample type | Separation protocol | First author | Year | EV-METRIC |
---|---|---|---|---|---|---|---|---|
EV230894 | 1/1 | Staphylococcus aureus | Newbould 305 (ATCC 29740) |
(d)(U)C DG Filtration UF |
Tartaglia NR | 2018 | 71% | |
Study summaryFull title
All authors
Tartaglia NR, Breyne K, Meyer E, Cauty C, Jardin J, Chrétien D, Dupont A, Demeyere K, Berkova N, Azevedo V, Guédon E, Le Loir Y
Journal
Front Cell Infect Microbiol
Abstract
is a major pathogen responsible for bovine mastitis, the most common and costly disease affecting da (show more...)
EV-METRIC
71% (96th percentile of all experiments on the same sample type)
Reported
Not reported Not applicable EV-enriched
proteins
Protein analysis: analysis of three or more EV-enriched proteins
non
EV-enriched protein
Protein analysis: assessment of a non-EV-enriched protein
qualitative
and quantitative analysis
Particle analysis: implementation of both qualitative and quantitative methods. For the quantitative method, the reporting of measured EV concentration is expected.
electron
microscopy images
Particle analysis: inclusion of a widefield and close-up electron microscopy image
density
gradient
Separation method: density gradient, at least as validation of results attributed to EVs
EV density
Separation method: reporting of obtained EV density
ultracentrifugation specifics
Separation method: reporting of g-forces, duration and rotor type of ultracentrifugation steps
antibody
specifics
Protein analysis: antibody clone/reference number and dilution
lysate
preparation
Protein analysis: lysis buffer composition
Study dataSample type
Cell culture supernatant
Sample origin
Control condition
Focus vesicles
extracellular vesicle
Separation protocol
Separation protocol
(Differential) (ultra)centrifugation
Density gradient Filtration Ultrafiltration Protein markers
EV: None
non-EV: None Proteomics
yes
EV density (g/ml)
1.08–1.13
Show all info
Study aim
Function/Identification of content (omics approaches)
Sample
Species
Staphylococcus aureus
Sample Type
Cell culture supernatant
EV-producing cells
Newbould 305 (ATCC 29740)
EV-harvesting Medium
Serum free medium
Separation Method
(Differential) (ultra)centrifugation
dUC: centrifugation steps
Between 800 g and 10,000 g
Equal to or above 150,000 g Pelleting performed
Yes
Pelleting: speed (g)
150000
Density gradient
Type
Discontinuous
Lowest density fraction
8%
Highest density fraction
68%
Speed (g)
100000
Duration (min)
150
Fraction processing
Centrifugation
Pelleting: speed (g)
150000
Pelleting: adjusted k-factor
TDB
Filtration steps
0.22µm or 0.2µm
Ultra filtration
Cut-off size (kDa)
100
Membrane type
NS
Characterization: Protein analysis
Protein Concentration Method
Bradford
Proteomics database
No
Characterization: Lipid analysis
No
Characterization: Particle analysis
NTA
Report type
Mean
Reported size (nm)
126
EV concentration
Yes
Particle yield
particles per milliliter of starting sample: 4.00E+09
TRPS
Report type
Mean
Reported size (nm)
67
EV concentration
Yes
Particle yield
particles per milliliter of starting sample: 4.00E+09
EM
EM-type
Transmission-EM/ Cryo-EM
Image type
Close-up, Wide-field
Report size (nm)
91
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1 - 1 of 1 |
EV-TRACK ID | EV230894 |
---|---|
species | Staphylococcus aureus |
sample type | Cell culture |
cell type | Newbould 305 (ATCC 29740) |
condition | Control condition |
separation protocol | dUC/ Density gradient/ Filtration/ Ultrafiltration |
Exp. nr. | 1 |
EV-METRIC % | 71 |