Search > Results
You searched for: EV230727 (EV-TRACK ID)
Showing 1 - 1 of 1
Showing 1 - 1 of 1
Details | EV-TRACK ID | Experiment nr. | Species | Sample type | Separation protocol | First author | Year | EV-METRIC |
---|---|---|---|---|---|---|---|---|
EV230727 | 1/1 | Streptococcus agalactiae | A909 |
(d)(U)C Filtration UF |
Surve MV | 2016 | 29% | |
Study summaryFull title
All authors
Surve MV, Anil A, Kamath KG, Bhutda S, Sthanam LK, Pradhan A, Srivastava R, Basu B, Dutta S, Sen S, Modi D, Banerjee A
Journal
PLoS Pathog
Abstract
Infection of the genitourinary tract with Group B Streptococcus (GBS), an opportunistic gram positiv (show more...)
EV-METRIC
29% (67th percentile of all experiments on the same sample type)
Reported
Not reported Not applicable EV-enriched
proteins
Protein analysis: analysis of three or more EV-enriched proteins
non
EV-enriched protein
Protein analysis: assessment of a non-EV-enriched protein
qualitative
and quantitative analysis
Particle analysis: implementation of both qualitative and quantitative methods. For the quantitative method, the reporting of measured EV concentration is expected.
electron
microscopy images
Particle analysis: inclusion of a widefield and close-up electron microscopy image
density
gradient
Separation method: density gradient, at least as validation of results attributed to EVs
EV density
Separation method: reporting of obtained EV density
ultracentrifugation specifics
Separation method: reporting of g-forces, duration and rotor type of ultracentrifugation steps
antibody
specifics
Protein analysis: antibody clone/reference number and dilution
lysate
preparation
Protein analysis: lysis buffer composition
Study dataSample type
Cell culture supernatant
Sample origin
Control condition
Focus vesicles
Membrane vesicle (MV)
Separation protocol
Separation protocol
(Differential) (ultra)centrifugation
Filtration Ultrafiltration Protein markers
EV: None
non-EV: None Proteomics
yes
Show all info
Study aim
Function/Identification of content (omics approaches)
Sample
Species
Streptococcus agalactiae
Sample Type
Cell culture supernatant
EV-producing cells
A909
EV-harvesting Medium
Serum free medium
Separation Method
(Differential) (ultra)centrifugation
dUC: centrifugation steps
Between 10,000 g and 50,000 g
Equal to or above 150,000 g Pelleting performed
Yes
Pelleting: speed (g)
150000
Filtration steps
0.22µm or 0.2µm
Ultra filtration
Cut-off size (kDa)
10
Membrane type
NS
Characterization: Protein analysis
Protein Concentration Method
Bradford
Proteomics database
No
Characterization: Lipid analysis
Yes
Characterization: Particle analysis
DLS
Report type
Size range/distribution
Reported size (nm)
0-50/ 150-300
Particle analysis: flow cytometry
Flow cytometer type
BD FACS Aria II
Hardware adjustment
Calibration bead size
4
EM
EM-type
Atomic force microscopy/ Scanning-EM
Image type
Close-up, Wide-field
|
||||||||
1 - 1 of 1 |
EV-TRACK ID | EV230727 |
---|---|
species | Streptococcus agalactiae |
sample type | Cell culture |
cell type | A909 |
condition | Control condition |
separation protocol | dUC/ Filtration/ Ultrafiltration |
Exp. nr. | 1 |
EV-METRIC % | 29 |