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You searched for: EV210163 (EV-TRACK ID)
Showing 1 - 5 of 5
Showing 1 - 5 of 5
Details | EV-TRACK ID | Experiment nr. | Species | Sample type | Separation protocol | First author | Year | EV-METRIC |
---|---|---|---|---|---|---|---|---|
EV210163 | 1/5 | Homo sapiens | Decidual |
(d)(U)C SEC (non-commercial) UF Filtration |
Shepherd Megan | 2021 | 67% | |
Study summaryFull title
All authors
Megan C Shepherd, Enkhtuya Radnaa, Ourlad Alzeus Tantengco, Talar Kechichian, Rheanna Urrabaz-Garza, Ananth Kumar Kammala, Samantha Sheller-Miller, Ramkumar Menon
Journal
Cell Commun Signal
Abstract
Background: Fetal cell-derived exosomes (extracellular vesicles, 40-160 nm) are communication channe (show more...)
EV-METRIC
67% (94th percentile of all experiments on the same sample type)
Reported
Not reported Not applicable EV-enriched
proteins
Protein analysis: analysis of three or more EV-enriched proteins
non
EV-enriched protein
Protein analysis: assessment of a non-EV-enriched protein
qualitative
and quantitative analysis
Particle analysis: implementation of both qualitative and quantitative methods. For the quantitative method, the reporting of measured EV concentration is expected.
electron
microscopy images
Particle analysis: inclusion of a widefield and close-up electron microscopy image
density
gradient
Separation method: density gradient, at least as validation of results attributed to EVs
EV density
Separation method: reporting of obtained EV density
ultracentrifugation specifics
Separation method: reporting of g-forces, duration and rotor type of ultracentrifugation steps
antibody
specifics
Protein analysis: antibody clone/reference number and dilution
lysate
preparation
Protein analysis: lysis buffer composition
Study dataSample type
Cell culture supernatant
Sample origin
Control condition
Focus vesicles
exosome
Separation protocol
Separation protocol
(Differential) (ultra)centrifugation
Size-exclusion chromatography (non-commercial) Ultrafiltration Filtration Protein markers
EV: TSG101/ CD63/ CD81/ Alix/ iCAM/ Flotillin1/ ANIXA S/ CD9
non-EV: GM130 Proteomics
yes
Show all info
Study aim
Function/Biomarker/Identification of content (omics approaches)/Mechanism of uptake/transfer
Sample
Species
Homo sapiens
Sample Type
Cell culture supernatant
EV-producing cells
Decidual
EV-harvesting Medium
EV-depleted medium
Preparation of EDS
overnight (16h) at >=100,000g
Separation Method
(Differential) (ultra)centrifugation
dUC: centrifugation steps
Below or equal to 800 g
Between 800 g and 10,000 g Between 10,000 g and 50,000 g Between 100,000 g and 150,000 g Pelleting performed
Yes
Pelleting: rotor type
Type 70.1Ti
Pelleting: speed (g)
100 000
Filtration steps
0.22µm or 0.2µm
Ultra filtration
Cut-off size (kDa)
10
Membrane type
Regenerated cellulose
Size-exclusion chromatography
Used for validation?
Yes
Total column volume (mL)
0,1
Sample volume/column (mL)
0,1
Characterization: Protein analysis
Protein Concentration Method
BCA
Western Blot
Antibody details provided?
Yes
Antibody dilution provided?
Yes
Lysis buffer provided?
Yes
Detected EV-associated proteins
Flotillin1/ CD9/ CD63/ ANIXA S/ iCAM/ TSG101/ Alix/ CD81
Not detected EV-associated proteins
CD81/ Flotillin1/ ANIXA S/ iCAM/ TSG101/ CD63/ CD9/ Alix
Detected contaminants
GM130
Not detected contaminants
GM130
Proteomics database
No
Detected EV-associated proteins
CD9/ CD63/ CD81
Characterization: Lipid analysis
No
Characterization: Particle analysis
NTA
Report type
Median
Reported size (nm)
115
EV concentration
Yes
Particle yield
as number of particles per milliliter of starting sample: 2.00e+0
EM
EM-type
Transmission-EM/ Cryo-EM
Image type
Close-up
Report size (nm)
100
|
||||||||
EV210163 | 2/5 | Homo sapiens | Myometrial |
(d)(U)C SEC (non-commercial) UF Filtration |
Shepherd Megan | 2021 | 67% | |
Study summaryFull title
All authors
Megan C Shepherd, Enkhtuya Radnaa, Ourlad Alzeus Tantengco, Talar Kechichian, Rheanna Urrabaz-Garza, Ananth Kumar Kammala, Samantha Sheller-Miller, Ramkumar Menon
Journal
Cell Commun Signal
Abstract
Background: Fetal cell-derived exosomes (extracellular vesicles, 40-160 nm) are communication channe (show more...)
EV-METRIC
67% (94th percentile of all experiments on the same sample type)
Reported
Not reported Not applicable EV-enriched
proteins
Protein analysis: analysis of three or more EV-enriched proteins
non
EV-enriched protein
Protein analysis: assessment of a non-EV-enriched protein
qualitative
and quantitative analysis
Particle analysis: implementation of both qualitative and quantitative methods. For the quantitative method, the reporting of measured EV concentration is expected.
electron
microscopy images
Particle analysis: inclusion of a widefield and close-up electron microscopy image
density
gradient
Separation method: density gradient, at least as validation of results attributed to EVs
EV density
Separation method: reporting of obtained EV density
ultracentrifugation specifics
Separation method: reporting of g-forces, duration and rotor type of ultracentrifugation steps
antibody
specifics
Protein analysis: antibody clone/reference number and dilution
lysate
preparation
Protein analysis: lysis buffer composition
Study dataSample type
Cell culture supernatant
Sample origin
Control condition
Focus vesicles
exosome
Separation protocol
Separation protocol
(Differential) (ultra)centrifugation
Size-exclusion chromatography (non-commercial) Ultrafiltration Filtration Protein markers
EV: TSG101/ CD63/ CD81/ Alix/ iCAM/ Flotillin1/ ANIXA S/ CD9
non-EV: GM130 Proteomics
yes
Show all info
Study aim
Function/Biomarker/Identification of content (omics approaches)/Mechanism of uptake/transfer
Sample
Species
Homo sapiens
Sample Type
Cell culture supernatant
EV-producing cells
Myometrial
EV-harvesting Medium
EV-depleted medium
Preparation of EDS
overnight (16h) at >=100,000g
Separation Method
(Differential) (ultra)centrifugation
dUC: centrifugation steps
Below or equal to 800 g
Between 800 g and 10,000 g Between 10,000 g and 50,000 g Between 100,000 g and 150,000 g Pelleting performed
Yes
Pelleting: rotor type
Type 70.1Ti
Pelleting: speed (g)
100 000
Filtration steps
0.22µm or 0.2µm
Ultra filtration
Cut-off size (kDa)
10
Membrane type
Regenerated cellulose
Size-exclusion chromatography
Used for validation?
Yes
Total column volume (mL)
0,1
Sample volume/column (mL)
0,1
Characterization: Protein analysis
Protein Concentration Method
BCA
Western Blot
Antibody details provided?
Yes
Antibody dilution provided?
Yes
Lysis buffer provided?
Yes
Detected EV-associated proteins
Flotillin1/ CD9/ CD63/ ANIXA S/ iCAM/ TSG101/ Alix/ CD81
Not detected EV-associated proteins
CD81/ Flotillin1/ ANIXA S/ iCAM/ TSG101/ CD63/ CD9/ Alix
Detected contaminants
GM130
Proteomics database
No
Detected EV-associated proteins
CD81/ CD9/ CD63
Characterization: Lipid analysis
No
Characterization: Particle analysis
NTA
Report type
Median
Reported size (nm)
116,075
EV concentration
Yes
Particle yield
as number of particles per milliliter of starting sample: 2.00e+0
EM
EM-type
Cryo-EM
Image type
Close-up
Report size (nm)
100
|
||||||||
EV210163 | 3/5 | Homo sapiens | Decidual |
(d)(U)C SEC (non-commercial) UF Filtration |
Shepherd Megan | 2021 | 67% | |
Study summaryFull title
All authors
Megan C Shepherd, Enkhtuya Radnaa, Ourlad Alzeus Tantengco, Talar Kechichian, Rheanna Urrabaz-Garza, Ananth Kumar Kammala, Samantha Sheller-Miller, Ramkumar Menon
Journal
Cell Commun Signal
Abstract
Background: Fetal cell-derived exosomes (extracellular vesicles, 40-160 nm) are communication channe (show more...)
EV-METRIC
67% (94th percentile of all experiments on the same sample type)
Reported
Not reported Not applicable EV-enriched
proteins
Protein analysis: analysis of three or more EV-enriched proteins
non
EV-enriched protein
Protein analysis: assessment of a non-EV-enriched protein
qualitative
and quantitative analysis
Particle analysis: implementation of both qualitative and quantitative methods. For the quantitative method, the reporting of measured EV concentration is expected.
electron
microscopy images
Particle analysis: inclusion of a widefield and close-up electron microscopy image
density
gradient
Separation method: density gradient, at least as validation of results attributed to EVs
EV density
Separation method: reporting of obtained EV density
ultracentrifugation specifics
Separation method: reporting of g-forces, duration and rotor type of ultracentrifugation steps
antibody
specifics
Protein analysis: antibody clone/reference number and dilution
lysate
preparation
Protein analysis: lysis buffer composition
Study dataSample type
Cell culture supernatant
Sample origin
Oxidative stress inducer (CSE) treated
Focus vesicles
exosome
Separation protocol
Separation protocol
(Differential) (ultra)centrifugation
Size-exclusion chromatography (non-commercial) Ultrafiltration Filtration Protein markers
EV: TSG101/ CD63/ CD81/ Alix/ iCAM/ Flotillin1/ ANIXA S/ CD9
non-EV: GM130 Proteomics
yes
Show all info
Study aim
Function/Biomarker/Identification of content (omics approaches)/Mechanism of uptake/transfer
Sample
Species
Homo sapiens
Sample Type
Cell culture supernatant
EV-producing cells
Decidual
EV-harvesting Medium
EV-depleted medium
Preparation of EDS
overnight (16h) at >=100,000g
Separation Method
(Differential) (ultra)centrifugation
dUC: centrifugation steps
Below or equal to 800 g
Between 800 g and 10,000 g Between 10,000 g and 50,000 g Between 100,000 g and 150,000 g Pelleting performed
Yes
Pelleting: rotor type
Type 70.1Ti
Pelleting: speed (g)
100 000
Filtration steps
0.22µm or 0.2µm
Ultra filtration
Cut-off size (kDa)
10
Membrane type
Regenerated cellulose
Size-exclusion chromatography
Used for validation?
Yes
Total column volume (mL)
0,1
Sample volume/column (mL)
0,1
Characterization: Protein analysis
Protein Concentration Method
BCA
Western Blot
Antibody details provided?
Yes
Antibody dilution provided?
Yes
Lysis buffer provided?
Yes
Detected EV-associated proteins
Flotillin1/ Alix/ CD9/ CD63/ TSG101/ ANIXA S/ iCAM/ CD81
Detected contaminants
GM130
Proteomics database
No
Detected EV-associated proteins
CD81/ CD9/ CD63
Characterization: Lipid analysis
No
Characterization: Particle analysis
NTA
Report type
Median
Reported size (nm)
116
EV concentration
Yes
Particle yield
as number of particles per milliliter of starting sample: 2.00e+0
EM
EM-type
Cryo-EM
Image type
Close-up
Report size (nm)
100
|
||||||||
EV210163 | 4/5 | Homo sapiens | Myometrial |
(d)(U)C SEC (non-commercial) UF Filtration |
Shepherd Megan | 2021 | 67% | |
Study summaryFull title
All authors
Megan C Shepherd, Enkhtuya Radnaa, Ourlad Alzeus Tantengco, Talar Kechichian, Rheanna Urrabaz-Garza, Ananth Kumar Kammala, Samantha Sheller-Miller, Ramkumar Menon
Journal
Cell Commun Signal
Abstract
Background: Fetal cell-derived exosomes (extracellular vesicles, 40-160 nm) are communication channe (show more...)
EV-METRIC
67% (94th percentile of all experiments on the same sample type)
Reported
Not reported Not applicable EV-enriched
proteins
Protein analysis: analysis of three or more EV-enriched proteins
non
EV-enriched protein
Protein analysis: assessment of a non-EV-enriched protein
qualitative
and quantitative analysis
Particle analysis: implementation of both qualitative and quantitative methods. For the quantitative method, the reporting of measured EV concentration is expected.
electron
microscopy images
Particle analysis: inclusion of a widefield and close-up electron microscopy image
density
gradient
Separation method: density gradient, at least as validation of results attributed to EVs
EV density
Separation method: reporting of obtained EV density
ultracentrifugation specifics
Separation method: reporting of g-forces, duration and rotor type of ultracentrifugation steps
antibody
specifics
Protein analysis: antibody clone/reference number and dilution
lysate
preparation
Protein analysis: lysis buffer composition
Study dataSample type
Cell culture supernatant
Sample origin
Oxidative stress inducer (CSE) treated
Focus vesicles
exosome
Separation protocol
Separation protocol
(Differential) (ultra)centrifugation
Size-exclusion chromatography (non-commercial) Ultrafiltration Filtration Protein markers
EV: TSG101/ CD63/ CD81/ Alix/ iCAM/ Flotillin1/ ANIXA S/ CD9
non-EV: GM130 Proteomics
yes
Show all info
Study aim
Function/Biomarker/Identification of content (omics approaches)/Mechanism of uptake/transfer
Sample
Species
Homo sapiens
Sample Type
Cell culture supernatant
EV-producing cells
Myometrial
EV-harvesting Medium
EV-depleted medium
Preparation of EDS
overnight (16h) at >=100,000g
Separation Method
(Differential) (ultra)centrifugation
dUC: centrifugation steps
Below or equal to 800 g
Between 800 g and 10,000 g Between 10,000 g and 50,000 g Between 100,000 g and 150,000 g Pelleting performed
Yes
Pelleting: rotor type
Type 70.1Ti
Pelleting: speed (g)
100 000
Filtration steps
0.22µm or 0.2µm
Ultra filtration
Cut-off size (kDa)
10
Membrane type
Regenerated cellulose
Size-exclusion chromatography
Used for validation?
Yes
Total column volume (mL)
0,1
Sample volume/column (mL)
0,1
Characterization: Protein analysis
Protein Concentration Method
BCA
Western Blot
Antibody details provided?
Yes
Antibody dilution provided?
Yes
Lysis buffer provided?
Yes
Detected EV-associated proteins
Flotillin1/ Alix/ ANIXA S/ iCAM/ CD9/ CD63/ TSG101/ CD81
Detected contaminants
GM130
Proteomics database
No
Detected EV-associated proteins
CD81/ CD9/ CD63
Characterization: Lipid analysis
No
Characterization: Particle analysis
NTA
Report type
Median
Reported size (nm)
116
EV concentration
Yes
Particle yield
as number of particles per milliliter of starting sample: 2.00e+0
EM
EM-type
Cryo-EM
Image type
Close-up
Report size (nm)
90
|
||||||||
EV210163 | 5/5 | Homo sapiens | Myometrial |
(d)(U)C SEC (non-commercial) UF Filtration |
Shepherd Megan | 2021 | 67% | |
Study summaryFull title
All authors
Megan C Shepherd, Enkhtuya Radnaa, Ourlad Alzeus Tantengco, Talar Kechichian, Rheanna Urrabaz-Garza, Ananth Kumar Kammala, Samantha Sheller-Miller, Ramkumar Menon
Journal
Cell Commun Signal
Abstract
Background: Fetal cell-derived exosomes (extracellular vesicles, 40-160 nm) are communication channe (show more...)
EV-METRIC
67% (94th percentile of all experiments on the same sample type)
Reported
Not reported Not applicable EV-enriched
proteins
Protein analysis: analysis of three or more EV-enriched proteins
non
EV-enriched protein
Protein analysis: assessment of a non-EV-enriched protein
qualitative
and quantitative analysis
Particle analysis: implementation of both qualitative and quantitative methods. For the quantitative method, the reporting of measured EV concentration is expected.
electron
microscopy images
Particle analysis: inclusion of a widefield and close-up electron microscopy image
density
gradient
Separation method: density gradient, at least as validation of results attributed to EVs
EV density
Separation method: reporting of obtained EV density
ultracentrifugation specifics
Separation method: reporting of g-forces, duration and rotor type of ultracentrifugation steps
antibody
specifics
Protein analysis: antibody clone/reference number and dilution
lysate
preparation
Protein analysis: lysis buffer composition
Study dataSample type
Cell culture supernatant
Sample origin
Inflammation inducer-TNF-alpha treated
Focus vesicles
exosome
Separation protocol
Separation protocol
(Differential) (ultra)centrifugation
Size-exclusion chromatography (non-commercial) Ultrafiltration Filtration Protein markers
EV: TSG101/ CD63/ CD81/ Alix/ iCAM/ Flotillin1/ ANIXA S/ CD9
non-EV: GM130 Proteomics
yes
Show all info
Study aim
Function/Biomarker/Identification of content (omics approaches)/Mechanism of uptake/transfer
Sample
Species
Homo sapiens
Sample Type
Cell culture supernatant
EV-producing cells
Myometrial
EV-harvesting Medium
EV-depleted medium
Preparation of EDS
overnight (16h) at >=100,000g
Separation Method
(Differential) (ultra)centrifugation
dUC: centrifugation steps
Below or equal to 800 g
Between 800 g and 10,000 g Between 10,000 g and 50,000 g Between 100,000 g and 150,000 g Pelleting performed
Yes
Pelleting: rotor type
Type 70.1Ti
Pelleting: speed (g)
100 000
Filtration steps
0.22µm or 0.2µm
Ultra filtration
Cut-off size (kDa)
10
Membrane type
Regenerated cellulose
Size-exclusion chromatography
Used for validation?
Yes
Total column volume (mL)
0,1
Sample volume/column (mL)
0,1
Characterization: Protein analysis
Protein Concentration Method
BCA
Western Blot
Antibody details provided?
Yes
Antibody dilution provided?
Yes
Lysis buffer provided?
Yes
Detected EV-associated proteins
Flotillin1/ ANIXA S/ iCAM/ CD9/ CD63/ TSG101/ Alix/ CD81
Detected contaminants
GM130
Proteomics database
No
Detected EV-associated proteins
CD81/ CD9/ CD63
Characterization: Lipid analysis
No
Characterization: Particle analysis
NTA
Report type
Median
Reported size (nm)
120
EV concentration
Yes
Particle yield
as number of particles per milliliter of starting sample: 2.00e+0
EM
EM-type
Cryo-EM
Image type
Close-up
Report size (nm)
90
|
||||||||
1 - 5 of 5 |
EV-TRACK ID | EV210163 | ||||
---|---|---|---|---|---|
species | Homo sapiens | ||||
sample type | Cell culture | ||||
cell type | Decidual | Myometrial | Decidual | Myometrial | Myometrial |
condition | Control condition | Control condition | Oxidative stress inducer (CSE) treated | Oxidative stress inducer (CSE) treated | Inflammation inducer-TNF-alpha treated |
separation protocol | dUC/ Size-exclusion chromatography (non-commercial)/ Ultrafiltration/ Filtration | dUC/ Size-exclusion chromatography (non-commercial)/ Ultrafiltration/ Filtration | dUC/ Size-exclusion chromatography (non-commercial)/ Ultrafiltration/ Filtration | dUC/ Size-exclusion chromatography (non-commercial)/ Ultrafiltration/ Filtration | dUC/ Size-exclusion chromatography (non-commercial)/ Ultrafiltration/ Filtration |
Exp. nr. | 1 | 2 | 3 | 4 | 5 |
EV-METRIC % | 67 | 67 | 67 | 67 | 67 |